SEARCH ENGINES | GENERAL SCIENCE LINKS
DNA SEQUENCE ANALYSIS AND MODELING OF PROTEINS
COURSES



SEARCH ENGINES
Searching Genbank: National Center for Biotechnology Information.
Advanced PubMed: Advanced MEDLINE Search.
The Human Genome: NCBI's Web site serves an an integrated, one-stop, genomic information infrastructure for biomedical researchers from around the world so that they may use this data in their research efforts.
GrantsNet, your one-stop resource to find funds for training in the biomedical sciences and undergraduate science education.

GENERAL SCIENCE LINKS
National Science Foundation World Wide Web Server
Federation of American Societies for Experimental Biology: Quality Life Through Research
The Arabidopsis Information Resource: The Arabidopsis thaliana Database (AtDB) project in the Department of Genetics at the School of Medicine, Stanford University.
Society for Neuroscience: The Society for Neuroscience is the world's largest organization of scientists and physicians dedicated to understanding the brain, spinal cord and peripheral nervous system.
Biology Links: Harvard University, Department of Molecular and Cellular Biology 
The Virtual Library of Energy Science and Technology: The Library's resources include three vast virtual collections covering each of the three main ways by which scientists communicate their findings: journal literature, grey literature, and preprints.
Federal R&D Project Summaries: Federal R&D Project Summaries is a portal to information about Federal research projects, complete with full-text single-query searching across databases residing at different agencies, developed by the Department of Energy's Office of Scientific and Technical Information (OSTI).
RZPD | ORI
Bioinformatics.org: The Open Lab: Bioinformatics.org is a non-profit, academe-based organization committed to opening access to bioinformatics research projects, providing Open Source software for bioinformatics by hosting its development, and keeping biological information freely available.

DNA SEQUENCE ANALYSIS AND MODELING OF PROTEINS
ExPASy Molecular Biology Server: This is the ExPASy molecular biology WWW server of the Swiss Institute of Bioinformatics (SIB). This server is dedicated to the analysis of protein sequences and structures.
Bioinformatics. A bioinformatics page at BSC.
Biocomputing 3D Modeling Unit Servers: the EMBL biocomputing 3D modelling unit server page
World Index of Molecular Visualization Resources : A Visitor-Maintained Indices (VMI)TM Site by Eric Martz and Trevor D. Kramer.
WHAT IF: a versatile protein structure analysis program that can be used for mutant prediction, structure verification, molecular graphics, etc.
Stanford Microarry Database:SMD stores raw and normalized data from microarray experiments, as well as their corresponding image files.
Homology Modeling for Beginners: an overview of available freeware, web resources, and of the limitations of homology models.
Molecular Modeling for Beginners: a tutorial using DeepView and SWISS-MODEL
The Protein Explorer:
http://proteinexplorer.org
Workshops:
http://www.umass.edu/molvis/workshop
World Index of Molecular Visualization Resources:
http://molvisindex.org
PDB Lite molecule finder:
http://pdblite.org
Molecular Graphics Manifesto. Why and How to Integrate Molecular Graphics into Introductory Biochemistry

COURSES
Biology 480/580 - Molecular Biology Laboratory Manual: Developed by Jonathan Monroe and Ivor Knight in the Department of Biology at James Madison University, Harrisonburg, VA.
Association for Biology Laboratory Education

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